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NumModel2LayerNetBC::NumModel2LayerNetBC(void)
NumModel2LayerNetBC::NumModel2LayerNetBC(const WeightMatrixC &,const NetVectorC &,const WeightMatrixC &,const NetVectorC &)
NumModel2LayerNetBC::NumModel2LayerNetBC(istream &)
NumModel2LayerNetBC::NumModel2LayerNetBC(const NumModel2LayerNetBC &)
NumModel2LayerNetBC::Copy(void) const
NumModel2LayerNetBC::operator=(const NumModel2LayerNetBC &)
NumModel2LayerNetBC::Evaluate(const VectorC &) const
NumModel2LayerNetBC::Fit(const NumVVDataSetC &)
NumModel2LayerNetBC::Save(ostream &) const
NumModel2LayerNetBC::Initialise(const NumVVDataSetC &)
NumModel2LayerNetBC::Train(const NumVVDataSetC &)
NumModel2LayerNetBC::InitialiseRandom(void)
NumModel2LayerNetBC::PresentInput(const VectorC &,const VectorC &)
NumModel2LayerNetBC::PresentInput(const VectorC &)
NumModel2LayerNetBC::InputError(const VectorC &,const VectorC &)
NumModel2LayerNetBC::MeanSquareError(const NumVVDataSetC &)
NumModel2LayerNetBC::DeltaOutputs(void)
NumModel2LayerNetBC::DeltaHidden(NetVectorC &)
NumModel2LayerNetBC::MaxOutput(void)
NumModel2LayerNetBC::PercentageCorrect(const NumVVDataSetC &)
NumModel2LayerNetBC::SetHiddenUnits(IntT)
NumModel2LayerNetBC::SetInitFlag(BooleanT)
NumModel2LayerNetBC::InputSize(void) const
NumModel2LayerNetBC::HiddenUnitSize(void) const
NumModel2LayerNetBC::OutputSize(void) const
NumModel2LayerNetBC::InputV(void) const
NumModel2LayerNetBC::FirstLayerW(void) const
NumModel2LayerNetBC::FirstLayerB(void) const
NumModel2LayerNetBC::HiddenOutputs(void) const
NumModel2LayerNetBC::SecondLayerW(void) const
NumModel2LayerNetBC::SecondLayerB(void) const
NumModel2LayerNetBC::OutputV(void) const
NumModel2LayerNetBC::TargetV(void) const
NumModel2LayerNetBC::on_line_Train(const NumVVDataSetC &)
NumModel2LayerNetBC::on_line_Train_WM(const NumVVDataSetC &)
NumModel2LayerNetBC::off_line_Train(const NumVVDataSetC &)
NumModel2LayerNetBC::off_line_Train_WM(const NumVVDataSetC &)
NumModel2LayerNetBC::RemoveInputNode(IntT,BooleanT)
NumModel2LayerNetBC::RemoveHiddenNode(IntT)
NumModel2LayerNetBC::Mao(const NumVVDataSetC &)
NumModel2LayerNetBC::UnitSelectionAlg(const NumVVDataSetC &)
NumModel2LayerNetBC::AWMS(NumVVDataSetC &,NumVVDataSetC &,IntT,RealT)
NumModel2LayerNetBC::SetCycles(IntT)
NumModel2LayerNetBC::SetLearningRate(RealT)
NumModel2LayerNetBC::SetMomentum(RealT)
NumModel2LayerNetBC::SetBounds(RealT,RealT)
NumModel2LayerNetBC::SetPenaltyTerm(BooleanT)
NumModel2LayerNetBC::SetVerbose(BooleanT)
NumModel2LayerNetBC::SetTrainingAlg(TrainMethod)
NumModel2LayerNetBC::Cycles(void) const
NumModel2LayerNetBC::LearningRate(void) const
NumModel2LayerNetBC::Momentum(void) const
NumModel2LayerNetBC::LowBounds(void) const
NumModel2LayerNetBC::HighBounds(void) const
NumModel2LayerNetBC::PenaltyTerm(void) const
NumModel2LayerNetBC::Verbose(void) const
NumModel2LayerNetBC::TrainingAlg(void) const
NumModelBC::Initialise(const NumVVDataSetC &)
NumModelBC::Fit(const NumVVDataSetC &)
NumModelBC::GetInfo(void) const
NumModelBC::Save(ostream &) const
NumFuncBC::Copy(void) const
NumFuncBC::SetSizeX(UIntT)
NumFuncBC::SetSizeY(UIntT)
NumFuncBC::Apply(const VectorC &)
NumFuncBC::Evaluate(const VectorC &) const
NumFuncBC::Evaluate(const DListC &) const
NumFuncBC::operator()(const VectorC &) const
NumFuncBC::Jacobian(const VectorC &) const
NumFuncBC::GetInfo(void) const
NumFuncBC::GetName(void) const
NumFuncBC::SizeX(void) const
NumFuncBC::SizeY(void) const
NumFuncBC::Save(ostream &) const
DPProcessBodyC::Apply(const InT &)
DPProcessBodyC::ApplyArray(const SArray1dC &,SArray1dC &)
DPProcessBodyC::Save(ostream &) const
DPProcessBodyC::InputType(void) const
DPProcessBodyC::OutputType(void) const
DPProcessBaseBodyC::Save(ostream &) const
DPProcessBaseBodyC::InputType(void) const
DPProcessBaseBodyC::OutputType(void) const
DPProcessBaseBodyC::OpType(void) const
DPProcessBaseBodyC::IsStateless(void) const
DPEntityBodyC::Save(ostream &) const
DPEntityBodyC::Copy(void) const
BodyRefCounterVC::Copy(void) const
BodyRefCounterVC::operator==(const BodyRefCounterVC &) const
BodyRefCounterVC::operator!=(const BodyRefCounterVC &) const
BodyRefCounterVC::Save(ostream &) const
BodyRefCounterC::AddReference(void)
BodyRefCounterC::RemoveReference(void)
BodyRefCounterC::SetConst(void) const
BodyRefCounterC::SetConst(void)
BodyRefCounterC::IsConst(void) const
BodyRefCounterC::IsNotConst(void) const
BodyRefCounterC::ToBeDeleted(void) const
BodyRefCounterC::ToBeDeletedRemoveIgnoreNoRemove(void)
BodyRefCounterC::ToBeDeletedRemove(void)
BodyRefCounterC::BodyMightBeDeleted(void) const
BodyRefCounterC::IsCountZero(void) const
BodyRefCounterC::BRCPtrCanDeleteObject(void) const
BodyRefCounterC::Count(void) const
BodyRefCounterC::operator=(const BodyRefCounterC &)
BodyRefCounterC::IsValidObject(void) const
BodyRefCounterC::UserBitTest(IntT) const
BodyRefCounterC::UserBitSet(IntT,BooleanT)
BodyRefCounterC::UserBitZero(IntT)
BodyRefCounterC::ReportBRCError(char *)
BodyRefCounterC::Hash(void) const
BodyRefCounterC::SetUndeletable(void)
BodyRefCounterC::ReportInvalidObject(char *) const
RefCounterBaseC::Label(void) const
NumModel2LayerNetBC
 
Two layer feed forward neural network implementation class
 
include "amma/Num/NumModel2LayerNetB.hh"
User Level:Default
Library:NumModelNeuralNet
Example:NetTest.cc
Section:default.Kieron Messer
In Scope:std

Comments:
Simple neural network class. The network constructed is fully connected, feed-forward and 2-layer (i.e. inputs, hidden-layer, output-layer). At present only the back-propagation training algorithm has been implemented. More algorithms will follow.

Parent Classes: Variables:
WeightMatrixC flw;
First layer weights

NetVectorC flb;
First layer bias

WeightMatrixC slw;
Second layer weights

NetVectorC slb;
Second layer bias

IntT hu;
number of hidden units

NetVectorC _nvInputs;
Vector holding current input values into network

NetVectorC _nvHiddenLayerOutputs;
Vector holding current hidden unit output values

NetVectorC _nvOutputs;
Vector holding current output state of network

NetVectorC _nvTarget;
Vector holding current target vector (if any) for input

BooleanT _bInitialise;
Flag determining whether network should be randomnly initialised before calling the training algorithm Net Options
--------------------------------------------

IntT cycles;
Number of cycles

RealT lr;
Learning rate for network

RealT mom;
Momentum rate for network

RealT low;
Lower bounds for initilisation

RealT high;
Higher bounds for initilistation

BooleanT penaltyTerm;
Do we want to use the penalty term whilst training

BooleanT verbose;
Do we want to train verbosely

TrainMethod trainAlg;
Which training algorithm should we use

Methods:
NumModel2LayerNetBC()
Constructs empty instance

NumModel2LayerNetBC(const WeightMatrixC & flw,const NetVectorC & flb,const WeightMatrixC & slw,const NetVectorC & slb)
Constructs from matrices etc

NumModel2LayerNetBC(istream & in)
Construct from the input stream

NumModel2LayerNetBC(const NumModel2LayerNetBC & in)
Constructs a new network from an old network

BodyRefCounterVC & Copy() const
Make a copy of network

const NumModel2LayerNetBC & operator=(const NumModel2LayerNetBC & net)
Assignment of big object

Methods required from NumModelC


VectorC Evaluate(const VectorC & input) const
Evaluates Y = f(x)

void Fit(const NumVVDataSetC & data)
Train the network

BooleanT Save(ostream & out) const
save the model to stream

void Initialise(const NumVVDataSetC & traindata)
Initialise the network structure on a dataset

void Train(const NumVVDataSetC & data)
Routine that trains the neural network on the dataset This assumes the dataset has been normalised

void InitialiseRandom()
Initialise the neural network structure with random values

void PresentInput(const VectorC & input,const VectorC & target)
Present a constant input/output pair across the network

void PresentInput(const VectorC & input)
Present an input and corresponding target output to the network

RealT InputError(const VectorC & in,const VectorC & target)
Compute the square sum error of a sample

RealT MeanSquareError(const NumVVDataSetC & in)
Compute the total square sum error of a sampleset

NetVectorC DeltaOutputs()
Compute the deltas for the output layer

NetVectorC DeltaHidden(NetVectorC & deltaOutU)
Compute the deltas for the hidden units

IndexT MaxOutput()
Return the index of the maximum valued current output

RealT PercentageCorrect(const NumVVDataSetC & in)
Calculate the percentage correct on a labelled dataset

void SetHiddenUnits(IntT num)
Set the number of hidden units to use

void SetInitFlag(BooleanT flag)
Set the number of hidden units to use

IntT InputSize() const
Return the input dimensionality

IntT HiddenUnitSize() const
Return the number of hidden units

IntT OutputSize() const
Return the output dimensionality

NetVectorC InputV() const
Look at the current input to the network

WeightMatrixC FirstLayerW() const
Return the first layer weights matrix

NetVectorC FirstLayerB() const
Return the first layer bias

NetVectorC HiddenOutputs() const
Return the outputs of the hidden layer

WeightMatrixC SecondLayerW() const
Return the second layer weight matrix

NetVectorC SecondLayerB() const
Return the second layer bias values

NetVectorC OutputV() const
The output of the network

NetVectorC TargetV() const
The target pattern

void on_line_Train(const NumVVDataSetC & in)
Train the network using bp on-line

void on_line_Train_WM(const NumVVDataSetC & in)
Train the network using bp on-line with momentum

void off_line_Train(const NumVVDataSetC & in)
Train the network using bp off-line (i.e. batch mode)

void off_line_Train_WM(const NumVVDataSetC & in)
Train the network using bpm off-line

void RemoveInputNode(IntT index,BooleanT delhu)
Deletes an input, including weights from the network

void RemoveHiddenNode(IntT index)
Deletes a hidden node, including weights and bias from the network

IntSArray1dC Mao(const NumVVDataSetC & dset)
Do pruning suggested by Mao

IntSArray1dC UnitSelectionAlg(const NumVVDataSetC & dset)
Perform average weight magnitude selection on a dataset. It assumes that the datasets have not been normalised
trainsetdataset of training vector pairs
verifysetdataset used for cross-validation
AcceptableErroruser sets what error they are prepared to accept
StopAtif error level never reached then stop at this number of inputs

IntSArray1dC AWMS(NumVVDataSetC & trainset,NumVVDataSetC & verifyset,IntT StopAt,RealT AcceptableError)
Perform average weight magnitude selection on a dataset. It assumes that the datasets have not been normalised
trainsetdataset of training vector pairs
verifysetdataset used for cross-validation
AcceptableErroruser sets what error they are prepared to accept
StopAtif error level never reached then stop at this number of inputs

void SetCycles(IntT cyc)
Set the number of epochs

void SetLearningRate(RealT learnrate)
Set the learning rate

void SetMomentum(RealT momentum)
Set momentum

void SetBounds(RealT lowValue,RealT highValue)
Set the bounds for random initialisation

void SetPenaltyTerm(BooleanT flag)
Penalise high weights and force low weights to zero

void SetVerbose(BooleanT flag)
Print out training progress to screen

void SetTrainingAlg(TrainMethod trainAlgorithm)
Set the training algorithm

IntT Cycles() const
Get the current number of cycles

RealT LearningRate() const
Get the current value of the learning rate

RealT Momentum() const
Get the current value of the momentum

RealT LowBounds() const
Get the low bounds of initialisation

RealT HighBounds() const
Get the higher bounds of initialisation

BooleanT PenaltyTerm() const
Get the status of the penalty term flag

BooleanT Verbose() const
Get the status of the verbose flag

TrainMethod TrainingAlg() const
Get the current training algorithm

Internal Object Representation


#include "amma/Num/NumModelB.hh"
void Initialise(const NumVVDataSetC & train)
Initialises model to an untrained state
Must be overloaded in derived class that train incrementally and provides a mechanism for restarting training from scratch.

void Fit(const NumVVDataSetC & train)
Allows function parameters to be selected to fit function to data

const StringC GetInfo() const
Prints derived class information

BooleanT Save(ostream & out) const
Writes object to stream, can be loaded using constructor

#include "amma/Num/NumFuncB.hh"
BodyRefCounterVC & Copy() const
Makes a deep copy and is virtual
As the copy constructor but is virtual so can be called from a base class reference.

void SetSizeX(UIntT X)
Sets size of input vector

void SetSizeY(UIntT Y)
Sets size of output vector

VectorC Apply(const VectorC & X)
Evaluate Y=f(X) as a process

VectorC Evaluate(const VectorC & X) const
Evaluate Y=f(X)
This is the main function that does all the work and must be overloaded in derived classes.

DListC<VectorC> Evaluate(const DListC<VectorC> & listX) const
Evaluate Y=f(X) for a list of X
This is achieved by iterating through the list of X and using the Evaluate member function that takes a single X. For sophisticated applications where speed is important, this function can be overloaded to do batch processing.

VectorC operator()(const VectorC & X) const
Evaluate Y=f(X)

MatrixC Jacobian(const VectorC & X) const
Calculate Jacobian matrix at X
Performs numerical estimation of the Jacobian using differences. This function has and should be overloaded for all cases where the Jacobian can be calculated analytically.

const StringC GetInfo() const
Derived class information

const StringC & GetName() const
Derived class type

UIntT SizeX() const
Size of input vectors

UIntT SizeY() const
Size of output vectors

BooleanT Save(ostream & out) const
Writes object to stream, can be loaded using constructor

#include "amma/DP/Process.hh"
VectorC Apply(const VectorC &)
Apply operation.

IntT ApplyArray(const SArray1dC<VectorC> & in,SArray1dC<VectorC> & out)
Apply operation to an array of elements.
returns the number of elements processed.

BooleanT Save(ostream & out) const
Save to ostream.

const type_info & InputType() const
Get input type.

const type_info & OutputType() const
Get input type.

BooleanT Save(ostream & out) const
Save to ostream.

const type_info & InputType() const
Get input type.

const type_info & OutputType() const
Get input type.

ProcTypeT OpType() const
Operation type lossy/lossless.

BooleanT IsStateless() const
Is operation stateless ?

#include "amma/DP/Entity.hh"
BooleanT Save(ostream & out) const
Save to ostream.

BodyRefCounterVC & Copy() const
Creat a copy of this object.

#include "amma/BRefCntV.hh"
BodyRefCounterVC & Copy() const
Creat a copy of this object.

BooleanT operator==(const BodyRefCounterVC & oth) const
Compair identitys.

BooleanT operator!=(const BodyRefCounterVC & oth) const
Compair identitys.

BooleanT Save(ostream & out) const
Save to ostream.

#include "amma/BRefCnt.hh"
void AddReference()
Another reference to the object has been created.

void RemoveReference()
One reference to the object was deleted.
Locking scheme -------------- The object is possible to lock (to make constant). The scheme assumes that the object is created, it can be locked, after that it can only be destroyed. The locked object cannot be unlocked. This locking scheme is very useful during debugging, using assert() function, when it is necassary to check that object is treated as constant and the constancy is not violated by any casting or passing through the copy constructor of shared objects.

void SetConst(void) const
This locks the object.
Often objects you wish to lock are already const.

void SetConst(void)
This locks the object.

BooleanT IsConst(void) const
Returns TRUE if the object is locked, ie. it is assumed to be constant.

BooleanT IsNotConst(void) const
Returns TRUE if the object is unlocked.
ie. there is no special information if the object is constant or not. Counter state information -------------------------

BooleanT ToBeDeleted() const
Returns TRUE if there is only one reference to the object and the whole object or its reference counting part can be deleted.

BooleanT ToBeDeletedRemoveIgnoreNoRemove()
Decrement refrence by 1 return true if this leaves no refrences to the object.

BooleanT ToBeDeletedRemove()
Decrement refrence by 1 return true if this leaves no refrences to the object. This also checks the NoRemove flag.

BooleanT BodyMightBeDeleted() const
Returns TRUE if the reference counted part of the object can be deleted, ie. flag NOREMOVE is false .

BooleanT IsCountZero() const
Are there any refrences left ?

BooleanT BRCPtrCanDeleteObject() const
Used by BRRCPtrC to establish if an object has ZERO refrences and can be deleted.

IntT Count() const
Returns the current state of the counter, ie. how many references to this object exist.

const BodyRefCounterC & operator=(const BodyRefCounterC & b)
It has not meaning to assign object 'b' to this object because it would destroy a history of the object which is counted. So this is a dummy function.

BooleanT IsValidObject() const
Test if object is valid.
When amma check is disabled this always returns true.

BooleanT UserBitTest(IntT x) const
Test user flag.

void UserBitSet(IntT x,BooleanT setit = TRUE)
Test user flag.

void UserBitZero(IntT x)
Set bit to zero.

void ReportBRCError(char * Msg)
Report error, used in BRCPtrC.

UIntT Hash() const
Hash on address of object.

void SetUndeletable()
Make object undeletable.
Usefull to prevent recursive deleting in graph structures. Only hackers need this function.

void ReportInvalidObject(char * Msg = 0) const
Tell user about validation failure.

#include "amma/RefCBase.hh"
LabelT Label() const
Returns the label of this reference counter.
The member function is useful mainly to recognize objects during debugging. The value of the label is uniquely defined pointer.


Programmer:Kieron Messer, Documentation by CxxDoc: Tue Mar 20 10:49:27 2001